Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Gm12350-201ENSMUST00000121208 462 ntBASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Gm44430-201ENSMUST00000203376 995 ntBASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Gm10060-201ENSMUST00000212002 111 ntBASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx55Q6ZPL9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx55Q6ZPL9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx55Q6ZPL9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx55Q6ZPL9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx55Q6ZPL9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx55Q6ZPL9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Gm8000-201ENSMUST00000188378 592 ntBASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx55Q6ZPL9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms