Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.25■□□□□ 0.83
Npc1l1Q6T3U4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Gm7153-201ENSMUST00000117092 455 ntBASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Npc1l1Q6T3U4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Gm13186-201ENSMUST00000118031 316 ntBASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Mir3081-201ENSMUST00000175305 84 ntBASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Npc1l1Q6T3U4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Gm6623-201ENSMUST00000173570 544 ntBASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.22■□□□□ 0.83
Npc1l1Q6T3U4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Mir770-201ENSMUST00000103252 94 ntBASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Npc1l1Q6T3U4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Npc1l1Q6T3U4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Npc1l1Q6T3U4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms