Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Gm15590-201ENSMUST00000078419 552 ntBASIC14.22□□□□□ -0.13
Rif1Q6PR54 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rif1Q6PR54 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rif1Q6PR54 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rif1Q6PR54 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.21□□□□□ -0.13
Rif1Q6PR54 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.21□□□□□ -0.14
Rif1Q6PR54 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.21□□□□□ -0.14
Rif1Q6PR54 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Gm27437-201ENSMUST00000183429 107 ntBASIC14.21□□□□□ -0.14
Rif1Q6PR54 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.21□□□□□ -0.14
Rif1Q6PR54 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rif1Q6PR54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gm43630-201ENSMUST00000201550 776 ntBASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gm5312-201ENSMUST00000203728 547 ntBASIC14.2□□□□□ -0.14
Rif1Q6PR54 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rif1Q6PR54 Gm10355-201ENSMUST00000097146 517 ntBASIC14.2□□□□□ -0.14
Rif1Q6PR54 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.2□□□□□ -0.14
Rif1Q6PR54 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Gm25990-201ENSMUST00000102440 86 ntBASIC14.19□□□□□ -0.14
Rif1Q6PR54 Gm13418-201ENSMUST00000119097 944 ntBASIC14.19□□□□□ -0.14
Rif1Q6PR54 Gm12428-201ENSMUST00000119844 727 ntBASIC14.19□□□□□ -0.14
Rif1Q6PR54 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rif1Q6PR54 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.19□□□□□ -0.14
Rif1Q6PR54 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms