Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup98Q6PFD9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Gm28659-201ENSMUST00000188013 759 ntBASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup98Q6PFD9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Nup98Q6PFD9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nup98Q6PFD9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup98Q6PFD9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Nup98Q6PFD9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Gm13884-201ENSMUST00000118103 829 ntBASIC19.87■□□□□ 0.77
Nup98Q6PFD9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup98Q6PFD9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup98Q6PFD9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.85■□□□□ 0.77
Nup98Q6PFD9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms