Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm4974-201ENSMUST00000209974 875 ntBASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dhx40Q6PE54 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dhx40Q6PE54 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
Dhx40Q6PE54 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Dhx40Q6PE54 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Gm37292-201ENSMUST00000192062 758 ntBASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dhx40Q6PE54 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Gm24841-201ENSMUST00000158676 357 ntBASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Gm20049-201ENSMUST00000219950 730 ntBASIC18.77■□□□□ 0.6
Dhx40Q6PE54 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Dhx40Q6PE54 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.77■□□□□ 0.59
Dhx40Q6PE54 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Dhx40Q6PE54 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms