Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Gm1401-201ENSMUST00000122048 772 ntBASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Gm18421-201ENSMUST00000204122 625 ntBASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Snrnp40Q6PE01 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Snrnp40Q6PE01 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Mir5131-201ENSMUST00000175426 93 ntBASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Gm27867-201ENSMUST00000184778 125 ntBASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Snrnp40Q6PE01 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Snrnp40Q6PE01 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Snrnp40Q6PE01 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Snrnp40Q6PE01 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Snrnp40Q6PE01 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Snrnp40Q6PE01 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Gm15165-201ENSMUST00000118140 502 ntBASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms