Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf220Q6PDX6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf220Q6PDX6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf220Q6PDX6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf220Q6PDX6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Gm10493-201ENSMUST00000097270 612 ntBASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf220Q6PDX6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf220Q6PDX6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms