Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Gm7638-201ENSMUST00000121348 967 ntBASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc2Q6PDG5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Gm7889-201ENSMUST00000185591 958 ntBASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Haglr-201ENSMUST00000100000 2085 ntBASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc2Q6PDG5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Il3ra-202ENSMUST00000223589 738 ntBASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc2Q6PDG5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
Smarcc2Q6PDG5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.69■□□□□ 0.74
Smarcc2Q6PDG5 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Gm27000-201ENSMUST00000182943 842 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms