Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim37Q6PCX9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim37Q6PCX9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gm27742-201ENSMUST00000184667 60 ntBASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gm7370-201ENSMUST00000219471 767 ntBASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim37Q6PCX9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Mir8098-201ENSMUST00000184011 137 ntBASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Birc2-201ENSMUST00000054878 378 ntBASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim37Q6PCX9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim37Q6PCX9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Gm13884-201ENSMUST00000118103 829 ntBASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim37Q6PCX9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms