Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm4Q6IRU2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm4Q6IRU2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Tpm4Q6IRU2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm4Q6IRU2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tpm4Q6IRU2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tpm4Q6IRU2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tpm4Q6IRU2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tpm4Q6IRU2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms