Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Gm10517-202ENSMUST00000192970 758 ntBASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Krt39Q6IFX4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Krt39Q6IFX4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Gm24841-201ENSMUST00000158676 357 ntBASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Krt39Q6IFX4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Krt39Q6IFX4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Krt39Q6IFX4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms