Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga7Q6DD96 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga7Q6DD96 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga7Q6DD96 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga7Q6DD96 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhga7Q6DD96 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Gm5643-201ENSMUST00000117081 966 ntBASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Gm13216-201ENSMUST00000117145 591 ntBASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhga7Q6DD96 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhga7Q6DD96 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhga7Q6DD96 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga7Q6DD96 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms