Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pds5aQ6A026 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pds5aQ6A026 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Gm13186-201ENSMUST00000118031 316 ntBASIC18.19■□□□□ 0.5
Pds5aQ6A026 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Gm26039-201ENSMUST00000158152 144 ntBASIC18.19■□□□□ 0.5
Pds5aQ6A026 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Gm27389-201ENSMUST00000183622 195 ntBASIC18.19■□□□□ 0.5
Pds5aQ6A026 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pds5aQ6A026 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pds5aQ6A026 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pds5aQ6A026 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Gm23634-201ENSMUST00000175071 91 ntBASIC18.16■□□□□ 0.5
Pds5aQ6A026 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.16■□□□□ 0.5
Pds5aQ6A026 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pds5aQ6A026 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Pds5aQ6A026 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.15■□□□□ 0.5
Pds5aQ6A026 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pds5aQ6A026 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pds5aQ6A026 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.15■□□□□ 0.5
Pds5aQ6A026 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pds5aQ6A026 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pds5aQ6A026 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pds5aQ6A026 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pds5aQ6A026 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.15■□□□□ 0.5
Pds5aQ6A026 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms