Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Gm37722-201ENSMUST00000193757 208 ntBASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pdzrn3Q69ZS0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pdzrn3Q69ZS0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pdzrn3Q69ZS0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Mir770-201ENSMUST00000103252 94 ntBASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Gm45328-201ENSMUST00000210942 917 ntBASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pdzrn3Q69ZS0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Pdzrn3Q69ZS0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Pdzrn3Q69ZS0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Gm18115-201ENSMUST00000221209 621 ntBASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdzrn3Q69ZS0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms