Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Gm18101-201ENSMUST00000215769 548 ntBASIC17.74■□□□□ 0.43
Scube3Q66PY1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.74■□□□□ 0.43
Scube3Q66PY1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scube3Q66PY1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scube3Q66PY1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Gm10013-201ENSMUST00000106074 672 ntBASIC17.72■□□□□ 0.43
Scube3Q66PY1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Gm21559-201ENSMUST00000220638 855 ntBASIC17.72■□□□□ 0.43
Scube3Q66PY1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Gm8587-201ENSMUST00000076538 843 ntBASIC17.72■□□□□ 0.43
Scube3Q66PY1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scube3Q66PY1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.71■□□□□ 0.43
Scube3Q66PY1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.71■□□□□ 0.43
Scube3Q66PY1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Gm6659-201ENSMUST00000174752 547 ntBASIC17.71■□□□□ 0.43
Scube3Q66PY1 Gm27389-201ENSMUST00000183622 195 ntBASIC17.71■□□□□ 0.43
Scube3Q66PY1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scube3Q66PY1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scube3Q66PY1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Scube3Q66PY1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Gm26039-201ENSMUST00000158152 144 ntBASIC17.7■□□□□ 0.42
Scube3Q66PY1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scube3Q66PY1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Scube3Q66PY1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scube3Q66PY1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms