Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VclQ64727 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VclQ64727 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
VclQ64727 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.62■□□□□ 0.25
VclQ64727 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Gm10013-201ENSMUST00000106074 672 ntBASIC16.62■□□□□ 0.25
VclQ64727 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.62■□□□□ 0.25
VclQ64727 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VclQ64727 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VclQ64727 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VclQ64727 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VclQ64727 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
VclQ64727 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VclQ64727 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VclQ64727 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
VclQ64727 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VclQ64727 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.61■□□□□ 0.25
VclQ64727 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VclQ64727 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VclQ64727 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
VclQ64727 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VclQ64727 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.6■□□□□ 0.25
VclQ64727 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VclQ64727 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.6■□□□□ 0.25
VclQ64727 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VclQ64727 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VclQ64727 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.6■□□□□ 0.25
VclQ64727 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.6■□□□□ 0.25
VclQ64727 Gm7370-201ENSMUST00000219471 767 ntBASIC16.6■□□□□ 0.25
VclQ64727 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VclQ64727 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VclQ64727 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.6■□□□□ 0.25
VclQ64727 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.59■□□□□ 0.25
VclQ64727 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VclQ64727 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VclQ64727 Gm22697-201ENSMUST00000175194 63 ntBASIC16.59■□□□□ 0.25
VclQ64727 Gm27389-201ENSMUST00000183622 195 ntBASIC16.59■□□□□ 0.25
VclQ64727 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VclQ64727 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VclQ64727 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.59■□□□□ 0.25
VclQ64727 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VclQ64727 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VclQ64727 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VclQ64727 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VclQ64727 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
VclQ64727 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VclQ64727 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VclQ64727 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.58■□□□□ 0.25
VclQ64727 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms