Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.03□□□□□ -0.16
Col7a1Q63870 Gm27622-201ENSMUST00000183779 60 ntBASIC14.03□□□□□ -0.16
Col7a1Q63870 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col7a1Q63870 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col7a1Q63870 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col7a1Q63870 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Col7a1Q63870 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col7a1Q63870 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col7a1Q63870 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.02□□□□□ -0.16
Col7a1Q63870 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.02□□□□□ -0.16
Col7a1Q63870 Gm5866-201ENSMUST00000177881 973 ntBASIC14.02□□□□□ -0.16
Col7a1Q63870 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col7a1Q63870 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col7a1Q63870 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col7a1Q63870 Gm15653-201ENSMUST00000119247 907 ntBASIC14.02□□□□□ -0.17
Col7a1Q63870 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Col7a1Q63870 Gm44492-201ENSMUST00000197012 141 ntBASIC14.02□□□□□ -0.17
Col7a1Q63870 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col7a1Q63870 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col7a1Q63870 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col7a1Q63870 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Notumos-201ENSMUST00000151998 2659 ntBASIC14.01□□□□□ -0.17
Col7a1Q63870 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.01□□□□□ -0.17
Col7a1Q63870 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col7a1Q63870 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Col7a1Q63870 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14□□□□□ -0.17
Col7a1Q63870 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Gm44430-201ENSMUST00000203376 995 ntBASIC14□□□□□ -0.17
Col7a1Q63870 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14□□□□□ -0.17
Col7a1Q63870 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Gm5837-201ENSMUST00000191844 1369 ntBASIC14□□□□□ -0.17
Col7a1Q63870 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14□□□□□ -0.17
Col7a1Q63870 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col7a1Q63870 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14□□□□□ -0.17
Col7a1Q63870 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14□□□□□ -0.17
Col7a1Q63870 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col7a1Q63870 Fst-202ENSMUST00000223640 2612 ntBASIC13.99□□□□□ -0.17
Col7a1Q63870 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.99□□□□□ -0.17
Col7a1Q63870 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col7a1Q63870 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.99□□□□□ -0.17
Col7a1Q63870 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.99□□□□□ -0.17
Col7a1Q63870 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col7a1Q63870 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms