Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Six3Q62233 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Six3Q62233 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.52■□□□□ 0.24
Six3Q62233 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.52■□□□□ 0.24
Six3Q62233 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.52■□□□□ 0.24
Six3Q62233 Gm37025-201ENSMUST00000195159 829 ntBASIC16.52■□□□□ 0.24
Six3Q62233 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Six3Q62233 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six3Q62233 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Six3Q62233 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six3Q62233 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Six3Q62233 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Six3Q62233 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Six3Q62233 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Six3Q62233 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.51■□□□□ 0.23
Six3Q62233 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Six3Q62233 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Six3Q62233 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Six3Q62233 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Six3Q62233 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.5■□□□□ 0.23
Six3Q62233 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Six3Q62233 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.5■□□□□ 0.23
Six3Q62233 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Six3Q62233 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Six3Q62233 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.5■□□□□ 0.23
Six3Q62233 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Six3Q62233 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Six3Q62233 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.5■□□□□ 0.23
Six3Q62233 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Six3Q62233 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six3Q62233 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Gm20760-201ENSMUST00000179197 648 ntBASIC16.49■□□□□ 0.23
Six3Q62233 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.49■□□□□ 0.23
Six3Q62233 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Six3Q62233 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Six3Q62233 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Six3Q62233 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.49■□□□□ 0.23
Six3Q62233 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Six3Q62233 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Six3Q62233 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms