Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn9aQ62205 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Scn9aQ62205 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn9aQ62205 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Gm44430-201ENSMUST00000203376 995 ntBASIC19.9■□□□□ 0.78
Scn9aQ62205 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn9aQ62205 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn9aQ62205 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn9aQ62205 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn9aQ62205 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.9■□□□□ 0.78
Scn9aQ62205 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.9■□□□□ 0.78
Scn9aQ62205 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Scn9aQ62205 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn9aQ62205 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn9aQ62205 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn9aQ62205 Gm13036-201ENSMUST00000117799 748 ntBASIC19.89■□□□□ 0.77
Scn9aQ62205 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn9aQ62205 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Scn9aQ62205 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn9aQ62205 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn9aQ62205 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.88■□□□□ 0.77
Scn9aQ62205 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn9aQ62205 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn9aQ62205 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn9aQ62205 Gm14140-201ENSMUST00000119999 995 ntBASIC19.88■□□□□ 0.77
Scn9aQ62205 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn9aQ62205 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn9aQ62205 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scn9aQ62205 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Scn9aQ62205 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.87■□□□□ 0.77
Scn9aQ62205 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn9aQ62205 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.86■□□□□ 0.77
Scn9aQ62205 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.86■□□□□ 0.77
Scn9aQ62205 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Scn9aQ62205 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn9aQ62205 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Scn9aQ62205 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Gm25911-201ENSMUST00000157621 56 ntBASIC19.85■□□□□ 0.77
Scn9aQ62205 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn9aQ62205 Auts2-212ENSMUST00000178555 309 ntBASIC19.85■□□□□ 0.77
Scn9aQ62205 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.85■□□□□ 0.77
Scn9aQ62205 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.85■□□□□ 0.77
Scn9aQ62205 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn9aQ62205 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn9aQ62205 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn9aQ62205 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm24513-201ENSMUST00000174964 138 ntBASIC19.84■□□□□ 0.77
Scn9aQ62205 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn9aQ62205 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms