Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SspnQ62147 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SspnQ62147 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SspnQ62147 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SspnQ62147 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.16□□□□□ -0.14
SspnQ62147 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.16□□□□□ -0.14
SspnQ62147 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SspnQ62147 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SspnQ62147 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Gm12527-201ENSMUST00000117967 564 ntBASIC14.16□□□□□ -0.14
SspnQ62147 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.16□□□□□ -0.14
SspnQ62147 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.16□□□□□ -0.14
SspnQ62147 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SspnQ62147 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.15□□□□□ -0.14
SspnQ62147 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SspnQ62147 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SspnQ62147 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.15□□□□□ -0.14
SspnQ62147 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.15□□□□□ -0.14
SspnQ62147 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SspnQ62147 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SspnQ62147 Gm37292-201ENSMUST00000192062 758 ntBASIC14.15□□□□□ -0.14
SspnQ62147 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SspnQ62147 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SspnQ62147 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SspnQ62147 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SspnQ62147 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SspnQ62147 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
SspnQ62147 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.14□□□□□ -0.15
SspnQ62147 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
SspnQ62147 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SspnQ62147 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.14□□□□□ -0.15
SspnQ62147 Gm4974-201ENSMUST00000209974 875 ntBASIC14.14□□□□□ -0.15
SspnQ62147 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SspnQ62147 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SspnQ62147 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.13□□□□□ -0.15
SspnQ62147 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SspnQ62147 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Gm10517-202ENSMUST00000192970 758 ntBASIC14.13□□□□□ -0.15
SspnQ62147 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.13□□□□□ -0.15
SspnQ62147 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms