Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.93■□□□□ 0.78
Ctr9Q62018 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.93■□□□□ 0.78
Ctr9Q62018 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ctr9Q62018 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ctr9Q62018 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Gm11355-201ENSMUST00000121120 306 ntBASIC19.92■□□□□ 0.78
Ctr9Q62018 Gm25016-201ENSMUST00000158399 131 ntBASIC19.92■□□□□ 0.78
Ctr9Q62018 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.92■□□□□ 0.78
Ctr9Q62018 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Ctr9Q62018 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ctr9Q62018 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.91■□□□□ 0.78
Ctr9Q62018 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ctr9Q62018 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Gm9013-201ENSMUST00000132939 882 ntBASIC19.91■□□□□ 0.78
Ctr9Q62018 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.91■□□□□ 0.78
Ctr9Q62018 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ctr9Q62018 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ctr9Q62018 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.9■□□□□ 0.78
Ctr9Q62018 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ctr9Q62018 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ctr9Q62018 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ctr9Q62018 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Ctr9Q62018 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ctr9Q62018 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.89■□□□□ 0.77
Ctr9Q62018 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ctr9Q62018 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ctr9Q62018 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms