Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gm17808-201ENSMUST00000200859 894 ntBASIC12.97□□□□□ -0.33
Notch3Q61982 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.97□□□□□ -0.33
Notch3Q61982 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Notch3Q61982 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.97□□□□□ -0.33
Notch3Q61982 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Notch3Q61982 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.97□□□□□ -0.33
Notch3Q61982 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Notch3Q61982 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.97□□□□□ -0.33
Notch3Q61982 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Notch3Q61982 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Notch3Q61982 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Notch3Q61982 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.96□□□□□ -0.33
Notch3Q61982 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.96□□□□□ -0.33
Notch3Q61982 Gm10566-201ENSMUST00000086739 996 ntBASIC12.96□□□□□ -0.33
Notch3Q61982 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Notch3Q61982 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Notch3Q61982 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.96□□□□□ -0.33
Notch3Q61982 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Notch3Q61982 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Notch3Q61982 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.96□□□□□ -0.34
Notch3Q61982 Gm18669-201ENSMUST00000216049 778 ntBASIC12.96□□□□□ -0.34
Notch3Q61982 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Notch3Q61982 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Notch3Q61982 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Notch3Q61982 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.95□□□□□ -0.34
Notch3Q61982 Gm24841-201ENSMUST00000158676 357 ntBASIC12.95□□□□□ -0.34
Notch3Q61982 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Notch3Q61982 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Notch3Q61982 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Notch3Q61982 Tgds-204ENSMUST00000228543 1594 ntBASIC12.95□□□□□ -0.34
Notch3Q61982 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Notch3Q61982 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.94□□□□□ -0.34
Notch3Q61982 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Notch3Q61982 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms