Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ecm1Q61508 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ecm1Q61508 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ecm1Q61508 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Ecm1Q61508 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.69■□□□□ 0.58
Ecm1Q61508 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Gm15165-201ENSMUST00000118140 502 ntBASIC18.69■□□□□ 0.58
Ecm1Q61508 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.69■□□□□ 0.58
Ecm1Q61508 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.69■□□□□ 0.58
Ecm1Q61508 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.69■□□□□ 0.58
Ecm1Q61508 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.69■□□□□ 0.58
Ecm1Q61508 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ecm1Q61508 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.68■□□□□ 0.58
Ecm1Q61508 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.68■□□□□ 0.58
Ecm1Q61508 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Gm44454-201ENSMUST00000198541 138 ntBASIC18.68■□□□□ 0.58
Ecm1Q61508 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.68■□□□□ 0.58
Ecm1Q61508 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ecm1Q61508 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Gm6296-201ENSMUST00000222599 943 ntBASIC18.67■□□□□ 0.58
Ecm1Q61508 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Gm5867-201ENSMUST00000063197 592 ntBASIC18.67■□□□□ 0.58
Ecm1Q61508 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ecm1Q61508 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ecm1Q61508 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.66■□□□□ 0.58
Ecm1Q61508 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Ecm1Q61508 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ecm1Q61508 Gm2651-201ENSMUST00000203560 838 ntBASIC18.66■□□□□ 0.58
Ecm1Q61508 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ecm1Q61508 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.66■□□□□ 0.58
Ecm1Q61508 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ecm1Q61508 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ecm1Q61508 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ecm1Q61508 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ecm1Q61508 Gm7862-201ENSMUST00000121461 292 ntBASIC18.65■□□□□ 0.58
Ecm1Q61508 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Gm8969-201ENSMUST00000199694 526 ntBASIC18.65■□□□□ 0.58
Ecm1Q61508 Gm6376-201ENSMUST00000209407 580 ntBASIC18.65■□□□□ 0.58
Ecm1Q61508 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.65■□□□□ 0.58
Ecm1Q61508 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ecm1Q61508 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.65■□□□□ 0.58
Ecm1Q61508 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ecm1Q61508 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms