Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.07■□□□□ 0
Cfhr1Q61406 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cfhr1Q61406 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cfhr1Q61406 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Cfhr1Q61406 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Cfhr1Q61406 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Gm28659-201ENSMUST00000188013 759 ntBASIC15.06■□□□□ 0
Cfhr1Q61406 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cfhr1Q61406 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cfhr1Q61406 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cfhr1Q61406 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cfhr1Q61406 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.05■□□□□ 0
Cfhr1Q61406 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cfhr1Q61406 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Cfhr1Q61406 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cfhr1Q61406 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfhr1Q61406 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Cfhr1Q61406 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cfhr1Q61406 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfhr1Q61406 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.05■□□□□ -0
Cfhr1Q61406 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfhr1Q61406 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cfhr1Q61406 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.05■□□□□ -0
Cfhr1Q61406 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cfhr1Q61406 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfhr1Q61406 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.05■□□□□ -0
Cfhr1Q61406 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cfhr1Q61406 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cfhr1Q61406 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cfhr1Q61406 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Cfhr1Q61406 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cfhr1Q61406 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cfhr1Q61406 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.04■□□□□ -0
Cfhr1Q61406 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cfhr1Q61406 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cfhr1Q61406 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cfhr1Q61406 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Gm15794-201ENSMUST00000120182 631 ntBASIC15.03■□□□□ -0
Cfhr1Q61406 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cfhr1Q61406 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Gm8969-201ENSMUST00000199694 526 ntBASIC15.03■□□□□ -0
Cfhr1Q61406 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cfhr1Q61406 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.03■□□□□ -0
Cfhr1Q61406 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cfhr1Q61406 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cfhr1Q61406 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cfhr1Q61406 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cfhr1Q61406 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.01□□□□□ -0.01
Cfhr1Q61406 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.01□□□□□ -0.01
Cfhr1Q61406 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfhr1Q61406 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.01□□□□□ -0.01
Cfhr1Q61406 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfhr1Q61406 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cfhr1Q61406 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms