Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.73■□□□□ 0.59
Ift88Q61371 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.73■□□□□ 0.59
Ift88Q61371 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Ift88Q61371 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ift88Q61371 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ift88Q61371 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ift88Q61371 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
Ift88Q61371 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ift88Q61371 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Ift88Q61371 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.72■□□□□ 0.59
Ift88Q61371 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.72■□□□□ 0.59
Ift88Q61371 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ift88Q61371 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ift88Q61371 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.72■□□□□ 0.59
Ift88Q61371 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ift88Q61371 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ift88Q61371 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ift88Q61371 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.71■□□□□ 0.59
Ift88Q61371 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.71■□□□□ 0.59
Ift88Q61371 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ift88Q61371 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ift88Q61371 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ift88Q61371 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ift88Q61371 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ift88Q61371 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ift88Q61371 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Ift88Q61371 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Ift88Q61371 Gm18666-201ENSMUST00000190039 958 ntBASIC18.7■□□□□ 0.58
Ift88Q61371 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.7■□□□□ 0.58
Ift88Q61371 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.7■□□□□ 0.58
Ift88Q61371 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.7■□□□□ 0.58
Ift88Q61371 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Gm20049-201ENSMUST00000219950 730 ntBASIC18.7■□□□□ 0.58
Ift88Q61371 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ift88Q61371 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.69■□□□□ 0.58
Ift88Q61371 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.69■□□□□ 0.58
Ift88Q61371 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ift88Q61371 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ift88Q61371 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.68■□□□□ 0.58
Ift88Q61371 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.68■□□□□ 0.58
Ift88Q61371 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms