Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Six4Q61321 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Six4Q61321 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
Six4Q61321 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.05■□□□□ 0.32
Six4Q61321 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.05■□□□□ 0.32
Six4Q61321 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six4Q61321 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
Six4Q61321 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.04■□□□□ 0.32
Six4Q61321 Gm18032-201ENSMUST00000222541 538 ntBASIC17.04■□□□□ 0.32
Six4Q61321 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six4Q61321 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Six4Q61321 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Mir1668-201ENSMUST00000184114 107 ntBASIC17.03■□□□□ 0.32
Six4Q61321 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six4Q61321 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Phf7-203ENSMUST00000226565 1971 ntBASIC17.02■□□□□ 0.32
Six4Q61321 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Gm13186-201ENSMUST00000118031 316 ntBASIC17.02■□□□□ 0.32
Six4Q61321 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.02■□□□□ 0.31
Six4Q61321 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Six4Q61321 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.01■□□□□ 0.31
Six4Q61321 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 1007.6 ms