Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Six4Q61321 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Six4Q61321 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.05■□□□□ 0.32
Six4Q61321 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.05■□□□□ 0.32
Six4Q61321 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.05■□□□□ 0.32
Six4Q61321 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Six4Q61321 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
Six4Q61321 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Six4Q61321 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.04■□□□□ 0.32
Six4Q61321 Gm18032-201ENSMUST00000222541 538 ntBASIC17.04■□□□□ 0.32
Six4Q61321 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Six4Q61321 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Six4Q61321 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six4Q61321 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Six4Q61321 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Mir1668-201ENSMUST00000184114 107 ntBASIC17.03■□□□□ 0.32
Six4Q61321 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Six4Q61321 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Six4Q61321 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Phf7-203ENSMUST00000226565 1971 ntBASIC17.02■□□□□ 0.32
Six4Q61321 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Gm13186-201ENSMUST00000118031 316 ntBASIC17.02■□□□□ 0.32
Six4Q61321 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.02■□□□□ 0.32
Six4Q61321 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Six4Q61321 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.02■□□□□ 0.31
Six4Q61321 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Six4Q61321 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Six4Q61321 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.01■□□□□ 0.31
Six4Q61321 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Six4Q61321 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Six4Q61321 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 1007.6 ms