Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col11a1Q61245 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col11a1Q61245 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.96■□□□□ 0.63
Col11a1Q61245 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col11a1Q61245 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.96■□□□□ 0.63
Col11a1Q61245 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
Col11a1Q61245 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col11a1Q61245 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col11a1Q61245 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.95■□□□□ 0.62
Col11a1Q61245 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.95■□□□□ 0.62
Col11a1Q61245 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.95■□□□□ 0.62
Col11a1Q61245 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col11a1Q61245 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.94■□□□□ 0.62
Col11a1Q61245 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col11a1Q61245 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.94■□□□□ 0.62
Col11a1Q61245 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.94■□□□□ 0.62
Col11a1Q61245 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.94■□□□□ 0.62
Col11a1Q61245 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.94■□□□□ 0.62
Col11a1Q61245 Gm6089-201ENSMUST00000197666 938 ntBASIC18.94■□□□□ 0.62
Col11a1Q61245 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.94■□□□□ 0.62
Col11a1Q61245 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.94■□□□□ 0.62
Col11a1Q61245 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.94■□□□□ 0.62
Col11a1Q61245 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col11a1Q61245 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Col11a1Q61245 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col11a1Q61245 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col11a1Q61245 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.92■□□□□ 0.62
Col11a1Q61245 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col11a1Q61245 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col11a1Q61245 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.92■□□□□ 0.62
Col11a1Q61245 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Col11a1Q61245 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col11a1Q61245 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Col11a1Q61245 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Grk6-206ENSMUST00000224995 2971 ntBASIC18.91■□□□□ 0.62
Col11a1Q61245 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.91■□□□□ 0.62
Col11a1Q61245 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.91■□□□□ 0.62
Col11a1Q61245 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col11a1Q61245 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.91■□□□□ 0.62
Col11a1Q61245 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Col11a1Q61245 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col11a1Q61245 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms