Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.1■□□□□ 0.33
Hif1aQ61221 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hif1aQ61221 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Hif1aQ61221 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Gm2559-201ENSMUST00000201323 363 ntBASIC17.1■□□□□ 0.33
Hif1aQ61221 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.1■□□□□ 0.33
Hif1aQ61221 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Hif1aQ61221 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.1■□□□□ 0.33
Hif1aQ61221 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hif1aQ61221 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Hif1aQ61221 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Hif1aQ61221 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.09■□□□□ 0.33
Hif1aQ61221 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.09■□□□□ 0.33
Hif1aQ61221 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.09■□□□□ 0.33
Hif1aQ61221 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Hif1aQ61221 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hif1aQ61221 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.08■□□□□ 0.33
Hif1aQ61221 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hif1aQ61221 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hif1aQ61221 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hif1aQ61221 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hif1aQ61221 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hif1aQ61221 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hif1aQ61221 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hif1aQ61221 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hif1aQ61221 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hif1aQ61221 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.06■□□□□ 0.32
Hif1aQ61221 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hif1aQ61221 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hif1aQ61221 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Hif1aQ61221 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.05■□□□□ 0.32
Hif1aQ61221 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hif1aQ61221 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms