Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.05■□□□□ 0.96
Irf9Q61179 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.05■□□□□ 0.96
Irf9Q61179 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.05■□□□□ 0.96
Irf9Q61179 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf9Q61179 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Irf9Q61179 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Irf9Q61179 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Irf9Q61179 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.04■□□□□ 0.96
Irf9Q61179 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf9Q61179 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.03■□□□□ 0.96
Irf9Q61179 Olfr129-201ENSMUST00000122318 993 ntBASIC21.03■□□□□ 0.96
Irf9Q61179 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.03■□□□□ 0.96
Irf9Q61179 Gm18421-201ENSMUST00000204122 625 ntBASIC21.03■□□□□ 0.96
Irf9Q61179 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Irf9Q61179 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf9Q61179 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Irf9Q61179 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.02■□□□□ 0.96
Irf9Q61179 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Irf9Q61179 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Gm15794-201ENSMUST00000120182 631 ntBASIC21.02■□□□□ 0.96
Irf9Q61179 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Gm28033-201ENSMUST00000184224 96 ntBASIC21.02■□□□□ 0.96
Irf9Q61179 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.02■□□□□ 0.96
Irf9Q61179 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf9Q61179 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Irf9Q61179 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.01■□□□□ 0.95
Irf9Q61179 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Irf9Q61179 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Gm27357-201ENSMUST00000183754 135 ntBASIC21.01■□□□□ 0.95
Irf9Q61179 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.01■□□□□ 0.95
Irf9Q61179 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Irf9Q61179 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.01■□□□□ 0.95
Irf9Q61179 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf9Q61179 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Mir3081-201ENSMUST00000175305 84 ntBASIC21■□□□□ 0.95
Irf9Q61179 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21■□□□□ 0.95
Irf9Q61179 Gm29707-201ENSMUST00000196325 491 ntBASIC21■□□□□ 0.95
Irf9Q61179 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Irf9Q61179 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Irf9Q61179 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf9Q61179 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Irf9Q61179 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf9Q61179 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms