Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC24.39■■□□□ 1.5
Ptch1Q61115 Gm6627-201ENSMUST00000218299 2386 ntBASIC24.39■■□□□ 1.5
Ptch1Q61115 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC24.39■■□□□ 1.5
Ptch1Q61115 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ptch1Q61115 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptch1Q61115 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ptch1Q61115 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptch1Q61115 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ptch1Q61115 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Ptch1Q61115 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC24.38■■□□□ 1.49
Ptch1Q61115 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Ptch1Q61115 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC24.38■■□□□ 1.49
Ptch1Q61115 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Grk6-206ENSMUST00000224995 2971 ntBASIC24.38■■□□□ 1.49
Ptch1Q61115 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ptch1Q61115 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Ptch1Q61115 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Ptch1Q61115 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC24.37■■□□□ 1.49
Ptch1Q61115 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ptch1Q61115 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.37■■□□□ 1.49
Ptch1Q61115 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC24.36■■□□□ 1.49
Ptch1Q61115 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Ptch1Q61115 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ptch1Q61115 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC24.35■■□□□ 1.49
Ptch1Q61115 Chchd1-203ENSMUST00000224633 557 ntBASIC24.35■■□□□ 1.49
Ptch1Q61115 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC24.35■■□□□ 1.49
Ptch1Q61115 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Ptch1Q61115 H2af-ps-201ENSMUST00000119066 295 ntBASIC24.35■■□□□ 1.49
Ptch1Q61115 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC24.35■■□□□ 1.49
Ptch1Q61115 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 AC154757.1-201ENSMUST00000228289 336 ntBASIC24.35■■□□□ 1.49
Ptch1Q61115 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ptch1Q61115 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Ptch1Q61115 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.34■■□□□ 1.49
Ptch1Q61115 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC24.34■■□□□ 1.49
Ptch1Q61115 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Ptch1Q61115 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Gm4459-201ENSMUST00000118750 468 ntBASIC24.34■■□□□ 1.49
Ptch1Q61115 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC24.34■■□□□ 1.49
Ptch1Q61115 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ptch1Q61115 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Ptch1Q61115 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ptch1Q61115 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ptch1Q61115 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ptch1Q61115 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ptch1Q61115 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Gm8349-201ENSMUST00000182720 1003 ntBASIC24.33■■□□□ 1.49
Ptch1Q61115 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC24.33■■□□□ 1.49
Ptch1Q61115 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ptch1Q61115 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Ptch1Q61115 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ptch1Q61115 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms