Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdf4Q61112 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.15■□□□□ 0.34
Sdf4Q61112 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.15■□□□□ 0.34
Sdf4Q61112 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdf4Q61112 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
Sdf4Q61112 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.14■□□□□ 0.33
Sdf4Q61112 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdf4Q61112 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Sdf4Q61112 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Sdf4Q61112 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdf4Q61112 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sdf4Q61112 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.13■□□□□ 0.33
Sdf4Q61112 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sdf4Q61112 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.13■□□□□ 0.33
Sdf4Q61112 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sdf4Q61112 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdf4Q61112 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdf4Q61112 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sdf4Q61112 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Sdf4Q61112 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sdf4Q61112 Gm27000-201ENSMUST00000182943 842 ntBASIC17.12■□□□□ 0.33
Sdf4Q61112 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdf4Q61112 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdf4Q61112 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sdf4Q61112 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.11■□□□□ 0.33
Sdf4Q61112 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.11■□□□□ 0.33
Sdf4Q61112 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms