Protein–RNA interactions for Protein: Q60949

Tbc1d1, TBC1 domain family member 1, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d1Q60949 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.21■□□□□ 0.51
Tbc1d1Q60949 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tbc1d1Q60949 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tbc1d1Q60949 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Gm13474-201ENSMUST00000122466 815 ntBASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tbc1d1Q60949 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tbc1d1Q60949 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tbc1d1Q60949 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms