Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc6a4Q60857 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Gm11950-201ENSMUST00000121615 838 ntBASIC17.32■□□□□ 0.36
Slc6a4Q60857 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.32■□□□□ 0.36
Slc6a4Q60857 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc6a4Q60857 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Slc6a4Q60857 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.31■□□□□ 0.36
Slc6a4Q60857 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm14859-201ENSMUST00000117752 357 ntBASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm11336-201ENSMUST00000118168 334 ntBASIC17.31■□□□□ 0.36
Slc6a4Q60857 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm6623-201ENSMUST00000173570 544 ntBASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.31■□□□□ 0.36
Slc6a4Q60857 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc6a4Q60857 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Gm27704-201ENSMUST00000185094 107 ntBASIC17.3■□□□□ 0.36
Slc6a4Q60857 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc6a4Q60857 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.3■□□□□ 0.36
Slc6a4Q60857 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc6a4Q60857 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.29■□□□□ 0.36
Slc6a4Q60857 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.29■□□□□ 0.36
Slc6a4Q60857 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc6a4Q60857 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.28■□□□□ 0.36
Slc6a4Q60857 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.28■□□□□ 0.36
Slc6a4Q60857 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Ank2-226ENSMUST00000189368 339 ntBASIC17.28■□□□□ 0.36
Slc6a4Q60857 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.28■□□□□ 0.36
Slc6a4Q60857 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc6a4Q60857 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms