Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Gm4535-201ENSMUST00000182274 558 ntBASIC16.71■□□□□ 0.27
Col12a1Q60847 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Gm10355-201ENSMUST00000097146 517 ntBASIC16.71■□□□□ 0.27
Col12a1Q60847 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col12a1Q60847 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.71■□□□□ 0.26
Col12a1Q60847 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.7■□□□□ 0.26
Col12a1Q60847 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col12a1Q60847 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.7■□□□□ 0.26
Col12a1Q60847 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col12a1Q60847 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.7■□□□□ 0.26
Col12a1Q60847 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.7■□□□□ 0.26
Col12a1Q60847 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col12a1Q60847 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.7■□□□□ 0.26
Col12a1Q60847 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
Col12a1Q60847 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.7■□□□□ 0.26
Col12a1Q60847 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.69■□□□□ 0.26
Col12a1Q60847 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.69■□□□□ 0.26
Col12a1Q60847 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.69■□□□□ 0.26
Col12a1Q60847 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Gm11780-201ENSMUST00000136880 516 ntBASIC16.69■□□□□ 0.26
Col12a1Q60847 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.69■□□□□ 0.26
Col12a1Q60847 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col12a1Q60847 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.68■□□□□ 0.26
Col12a1Q60847 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Gm8396-201ENSMUST00000057361 823 ntBASIC16.68■□□□□ 0.26
Col12a1Q60847 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Gm18421-201ENSMUST00000204122 625 ntBASIC16.68■□□□□ 0.26
Col12a1Q60847 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Col12a1Q60847 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Gm5745-201ENSMUST00000183748 313 ntBASIC16.68■□□□□ 0.26
Col12a1Q60847 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col12a1Q60847 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col12a1Q60847 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col12a1Q60847 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.67■□□□□ 0.26
Col12a1Q60847 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Gm13616-201ENSMUST00000120600 222 ntBASIC16.67■□□□□ 0.26
Col12a1Q60847 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col12a1Q60847 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.67■□□□□ 0.26
Col12a1Q60847 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Col12a1Q60847 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.67■□□□□ 0.26
Col12a1Q60847 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.67■□□□□ 0.26
Col12a1Q60847 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms