Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Satb1Q60611 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.49■□□□□ 0.39
Satb1Q60611 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Satb1Q60611 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Satb1Q60611 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Satb1Q60611 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Satb1Q60611 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.48■□□□□ 0.39
Satb1Q60611 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Satb1Q60611 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Gm7638-201ENSMUST00000121348 967 ntBASIC17.48■□□□□ 0.39
Satb1Q60611 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.48■□□□□ 0.39
Satb1Q60611 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.48■□□□□ 0.39
Satb1Q60611 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.48■□□□□ 0.39
Satb1Q60611 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.48■□□□□ 0.39
Satb1Q60611 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Satb1Q60611 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Satb1Q60611 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.47■□□□□ 0.39
Satb1Q60611 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.47■□□□□ 0.39
Satb1Q60611 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Gm18195-201ENSMUST00000207604 706 ntBASIC17.47■□□□□ 0.39
Satb1Q60611 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Satb1Q60611 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Satb1Q60611 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Satb1Q60611 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.46■□□□□ 0.39
Satb1Q60611 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.46■□□□□ 0.39
Satb1Q60611 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Satb1Q60611 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Satb1Q60611 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Satb1Q60611 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Satb1Q60611 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Satb1Q60611 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.45■□□□□ 0.38
Satb1Q60611 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Gm11452-201ENSMUST00000122376 690 ntBASIC17.45■□□□□ 0.38
Satb1Q60611 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.45■□□□□ 0.38
Satb1Q60611 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Satb1Q60611 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.45■□□□□ 0.38
Satb1Q60611 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Satb1Q60611 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.45■□□□□ 0.38
Satb1Q60611 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Satb1Q60611 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Satb1Q60611 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Satb1Q60611 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.44■□□□□ 0.38
Satb1Q60611 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Satb1Q60611 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.44■□□□□ 0.38
Satb1Q60611 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Satb1Q60611 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.44■□□□□ 0.38
Satb1Q60611 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.44■□□□□ 0.38
Satb1Q60611 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms