Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim38Q5SZ99 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Gm13216-201ENSMUST00000117145 591 ntBASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Gm18958-201ENSMUST00000174258 762 ntBASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Gm3375-201ENSMUST00000203929 796 ntBASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim38Q5SZ99 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Gm27000-201ENSMUST00000182943 842 ntBASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim38Q5SZ99 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.52■□□□□ 0.39
Trim38Q5SZ99 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Gm21814-202ENSMUST00000203277 873 ntBASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Trim38Q5SZ99 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Mir5122-201ENSMUST00000175004 89 ntBASIC17.5■□□□□ 0.39
Trim38Q5SZ99 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Gm7791-201ENSMUST00000219066 539 ntBASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim38Q5SZ99 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim38Q5SZ99 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms