Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc85aQ5SP85 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Gm6296-201ENSMUST00000222599 943 ntBASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc85aQ5SP85 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc85aQ5SP85 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc85aQ5SP85 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Gm7862-201ENSMUST00000121461 292 ntBASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Gm27867-201ENSMUST00000184778 125 ntBASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc85aQ5SP85 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc85aQ5SP85 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Gm2213-201ENSMUST00000197485 688 ntBASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc85aQ5SP85 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Rprl3-201ENSMUST00000157400 290 ntBASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Gm8000-201ENSMUST00000188378 592 ntBASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc85aQ5SP85 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms