Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Lrrfip1Q3UZ39 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Mir5130-201ENSMUST00000175160 84 ntBASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Gm45058-201ENSMUST00000205810 766 ntBASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrfip1Q3UZ39 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.21■□□□□ 0.67
Lrrfip1Q3UZ39 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Lrrfip1Q3UZ39 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm16061-201ENSMUST00000122167 857 ntBASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm18958-201ENSMUST00000174258 762 ntBASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm7370-201ENSMUST00000219471 767 ntBASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrfip1Q3UZ39 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrfip1Q3UZ39 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrfip1Q3UZ39 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrrfip1Q3UZ39 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms