Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf223Q3UV31 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Ank2-226ENSMUST00000189368 339 ntBASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf223Q3UV31 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf223Q3UV31 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf223Q3UV31 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf223Q3UV31 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf223Q3UV31 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.39■□□□□ 0.21
Rnf223Q3UV31 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf223Q3UV31 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Gm18115-201ENSMUST00000221209 621 ntBASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf223Q3UV31 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Gm44450-201ENSMUST00000199528 114 ntBASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf223Q3UV31 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf223Q3UV31 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms