Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfswapQ3USH5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfswapQ3USH5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfswapQ3USH5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.16■□□□□ 0.82
SfswapQ3USH5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SfswapQ3USH5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Gm17807-201ENSMUST00000186869 298 ntBASIC20.15■□□□□ 0.82
SfswapQ3USH5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SfswapQ3USH5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.14■□□□□ 0.82
SfswapQ3USH5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SfswapQ3USH5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SfswapQ3USH5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Phf7-203ENSMUST00000226565 1971 ntBASIC20.14■□□□□ 0.81
SfswapQ3USH5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.14■□□□□ 0.81
SfswapQ3USH5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.14■□□□□ 0.81
SfswapQ3USH5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Gm11336-201ENSMUST00000118168 334 ntBASIC20.14■□□□□ 0.81
SfswapQ3USH5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SfswapQ3USH5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Gm27741-201ENSMUST00000185060 237 ntBASIC20.13■□□□□ 0.81
SfswapQ3USH5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.13■□□□□ 0.81
SfswapQ3USH5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.13■□□□□ 0.81
SfswapQ3USH5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SfswapQ3USH5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SfswapQ3USH5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Gm13186-201ENSMUST00000118031 316 ntBASIC20.11■□□□□ 0.81
SfswapQ3USH5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SfswapQ3USH5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.1■□□□□ 0.81
SfswapQ3USH5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SfswapQ3USH5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms