Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Gm15372-201ENSMUST00000120729 834 ntBASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnrc6aQ3UHK8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Gm13884-201ENSMUST00000118103 829 ntBASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Tnrc6aQ3UHK8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Gm12895-201ENSMUST00000122214 226 ntBASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc6aQ3UHK8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc6aQ3UHK8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Gm18733-201ENSMUST00000173950 856 ntBASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc6aQ3UHK8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Tnrc6aQ3UHK8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc6aQ3UHK8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc6aQ3UHK8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc6aQ3UHK8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms