Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Gm13474-201ENSMUST00000122466 815 ntBASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf44Q3UHJ8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf44Q3UHJ8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf44Q3UHJ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf44Q3UHJ8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf44Q3UHJ8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf44Q3UHJ8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Gm10231-201ENSMUST00000181584 441 ntBASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Gm10175-202ENSMUST00000208752 441 ntBASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf44Q3UHJ8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms