Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Gm27357-201ENSMUST00000183754 135 ntBASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.27■□□□□ 0.52
Snx27Q3UHD6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Snx27Q3UHD6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Gm28033-201ENSMUST00000184224 96 ntBASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Gm18669-201ENSMUST00000216049 778 ntBASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx27Q3UHD6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Gm15794-201ENSMUST00000120182 631 ntBASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Mir3081-201ENSMUST00000175305 84 ntBASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx27Q3UHD6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Olfr129-201ENSMUST00000122318 993 ntBASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Gm18421-201ENSMUST00000204122 625 ntBASIC18.24■□□□□ 0.51
Snx27Q3UHD6 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.24■□□□□ 0.51
Snx27Q3UHD6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Gm29707-201ENSMUST00000196325 491 ntBASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx27Q3UHD6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Gm17971-201ENSMUST00000190239 806 ntBASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx27Q3UHD6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Gm27741-201ENSMUST00000185060 237 ntBASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx27Q3UHD6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Snx27Q3UHD6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snx27Q3UHD6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms