Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Palb2Q3U0P1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Palb2Q3U0P1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Palb2Q3U0P1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Palb2Q3U0P1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Palb2Q3U0P1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Gm11452-201ENSMUST00000122376 690 ntBASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Gm18733-201ENSMUST00000173950 856 ntBASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.82■□□□□ 0.6
Palb2Q3U0P1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Palb2Q3U0P1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Palb2Q3U0P1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms