Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Gm6345-202ENSMUST00000180900 204 ntBASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shcbp1lQ3TTP0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.04■□□□□ 0.32
Shcbp1lQ3TTP0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Gm21362-201ENSMUST00000194272 928 ntBASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Shcbp1lQ3TTP0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Gm9013-201ENSMUST00000132939 882 ntBASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Shcbp1lQ3TTP0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shcbp1lQ3TTP0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.02■□□□□ 0.31
Shcbp1lQ3TTP0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shcbp1lQ3TTP0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shcbp1lQ3TTP0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm33142-201ENSMUST00000193913 867 ntBASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm7367-201ENSMUST00000057611 492 ntBASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.01■□□□□ 0.31
Shcbp1lQ3TTP0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms