Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim63Q38HM4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim63Q38HM4 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.03□□□□□ -0.16
Trim63Q38HM4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim63Q38HM4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim63Q38HM4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.02□□□□□ -0.16
Trim63Q38HM4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Gm14523-201ENSMUST00000117260 558 ntBASIC14.02□□□□□ -0.17
Trim63Q38HM4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.02□□□□□ -0.17
Trim63Q38HM4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Gm10399-202ENSMUST00000202768 748 ntBASIC14.02□□□□□ -0.17
Trim63Q38HM4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.02□□□□□ -0.17
Trim63Q38HM4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim63Q38HM4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim63Q38HM4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.01□□□□□ -0.17
Trim63Q38HM4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.01□□□□□ -0.17
Trim63Q38HM4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Gm27502-201ENSMUST00000183495 199 ntBASIC14.01□□□□□ -0.17
Trim63Q38HM4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim63Q38HM4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim63Q38HM4 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.01□□□□□ -0.17
Trim63Q38HM4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms