Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.12■□□□□ 0.01
Chd8Q09XV5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Mir449b-201ENSMUST00000104833 80 ntBASIC15.11■□□□□ 0.01
Chd8Q09XV5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd8Q09XV5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.1■□□□□ 0.01
Chd8Q09XV5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.1■□□□□ 0.01
Chd8Q09XV5 Gm44492-201ENSMUST00000197012 141 ntBASIC15.1■□□□□ 0.01
Chd8Q09XV5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chd8Q09XV5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chd8Q09XV5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.08■□□□□ 0
Chd8Q09XV5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.08■□□□□ 0
Chd8Q09XV5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.08■□□□□ 0
Chd8Q09XV5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.08■□□□□ 0
Chd8Q09XV5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.08■□□□□ 0
Chd8Q09XV5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.08■□□□□ 0
Chd8Q09XV5 Gm7506-201ENSMUST00000207758 815 ntBASIC15.08■□□□□ 0
Chd8Q09XV5 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.08■□□□□ 0
Chd8Q09XV5 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.08■□□□□ 0
Chd8Q09XV5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Chd8Q09XV5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chd8Q09XV5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Phf7-203ENSMUST00000226565 1971 ntBASIC15.08■□□□□ 0
Chd8Q09XV5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.08■□□□□ 0
Chd8Q09XV5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Chd8Q09XV5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms