Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Col17a1Q07563 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC26.1■■□□□ 1.77
Col17a1Q07563 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Col17a1Q07563 Gm13365-201ENSMUST00000121188 973 ntBASIC26.1■■□□□ 1.77
Col17a1Q07563 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
Col17a1Q07563 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC26.1■■□□□ 1.77
Col17a1Q07563 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Col17a1Q07563 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col17a1Q07563 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col17a1Q07563 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col17a1Q07563 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC26.09■■□□□ 1.77
Col17a1Q07563 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC26.09■■□□□ 1.77
Col17a1Q07563 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC26.09■■□□□ 1.77
Col17a1Q07563 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC26.09■■□□□ 1.77
Col17a1Q07563 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col17a1Q07563 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col17a1Q07563 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Gm45906-201ENSMUST00000208911 1430 ntBASIC26.08■■□□□ 1.77
Col17a1Q07563 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Gm5682-201ENSMUST00000173402 505 ntBASIC26.08■■□□□ 1.77
Col17a1Q07563 AC131709.1-201ENSMUST00000224731 1180 ntBASIC26.08■■□□□ 1.77
Col17a1Q07563 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC26.08■■□□□ 1.77
Col17a1Q07563 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col17a1Q07563 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Col17a1Q07563 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Gtpbp10-211ENSMUST00000198799 648 ntBASIC26.07■■□□□ 1.76
Col17a1Q07563 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC26.07■■□□□ 1.76
Col17a1Q07563 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col17a1Q07563 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Col17a1Q07563 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC26.06■■□□□ 1.76
Col17a1Q07563 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Col17a1Q07563 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC26.06■■□□□ 1.76
Col17a1Q07563 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Col17a1Q07563 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC26.06■■□□□ 1.76
Col17a1Q07563 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC26.06■■□□□ 1.76
Col17a1Q07563 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm22175-201ENSMUST00000175007 78 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm8825-201ENSMUST00000182565 998 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm27300-201ENSMUST00000184085 97 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm27335-201ENSMUST00000184758 97 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm43433-201ENSMUST00000196573 481 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 AC159106.1-201ENSMUST00000224421 690 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm2423-201ENSMUST00000074863 733 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC26.05■■□□□ 1.76
Col17a1Q07563 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Col17a1Q07563 Gm5837-201ENSMUST00000191844 1369 ntBASIC26.05■■□□□ 1.76
Col17a1Q07563 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col17a1Q07563 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Col17a1Q07563 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC26.04■■□□□ 1.76
Col17a1Q07563 Gm18187-201ENSMUST00000196476 984 ntBASIC26.04■■□□□ 1.76
Col17a1Q07563 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Col17a1Q07563 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
Col17a1Q07563 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Col17a1Q07563 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC26.03■■□□□ 1.76
Col17a1Q07563 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 AC132467.2-202ENSMUST00000227726 559 ntBASIC26.03■■□□□ 1.76
Col17a1Q07563 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col17a1Q07563 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col17a1Q07563 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Col17a1Q07563 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC26.02■■□□□ 1.76
Col17a1Q07563 Gm38319-201ENSMUST00000194537 1266 ntBASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms