Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
IhhP97812 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IhhP97812 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
IhhP97812 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
IhhP97812 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.53■□□□□ 0.4
IhhP97812 Gm25016-201ENSMUST00000158399 131 ntBASIC17.53■□□□□ 0.4
IhhP97812 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IhhP97812 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
IhhP97812 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IhhP97812 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.52■□□□□ 0.4
IhhP97812 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.52■□□□□ 0.4
IhhP97812 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
IhhP97812 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
IhhP97812 Gm33142-201ENSMUST00000193913 867 ntBASIC17.52■□□□□ 0.4
IhhP97812 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IhhP97812 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
IhhP97812 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IhhP97812 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.52■□□□□ 0.4
IhhP97812 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IhhP97812 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
IhhP97812 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IhhP97812 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.51■□□□□ 0.39
IhhP97812 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
IhhP97812 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IhhP97812 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.51■□□□□ 0.39
IhhP97812 Gm18421-201ENSMUST00000204122 625 ntBASIC17.51■□□□□ 0.39
IhhP97812 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
IhhP97812 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
IhhP97812 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
IhhP97812 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IhhP97812 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.5■□□□□ 0.39
IhhP97812 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
IhhP97812 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IhhP97812 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IhhP97812 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
IhhP97812 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.49■□□□□ 0.39
IhhP97812 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.49■□□□□ 0.39
IhhP97812 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IhhP97812 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms