Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.99□□□□□ -0.17
Gfra1P97785 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.99□□□□□ -0.17
Gfra1P97785 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Gm25016-201ENSMUST00000158399 131 ntBASIC13.99□□□□□ -0.17
Gfra1P97785 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Gfra1P97785 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.99□□□□□ -0.17
Gfra1P97785 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.99□□□□□ -0.17
Gfra1P97785 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gfra1P97785 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Gfra1P97785 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Gfra1P97785 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Gfra1P97785 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.98□□□□□ -0.17
Gfra1P97785 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.98□□□□□ -0.17
Gfra1P97785 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.98□□□□□ -0.17
Gfra1P97785 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.98□□□□□ -0.17
Gfra1P97785 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gfra1P97785 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Gfra1P97785 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.97□□□□□ -0.17
Gfra1P97785 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.97□□□□□ -0.17
Gfra1P97785 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.97□□□□□ -0.17
Gfra1P97785 Gm21559-201ENSMUST00000220638 855 ntBASIC13.97□□□□□ -0.17
Gfra1P97785 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Gm8587-201ENSMUST00000076538 843 ntBASIC13.97□□□□□ -0.17
Gfra1P97785 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.97□□□□□ -0.17
Gfra1P97785 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Gfra1P97785 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.97□□□□□ -0.17
Gfra1P97785 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Gfra1P97785 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.97□□□□□ -0.17
Gfra1P97785 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Gfra1P97785 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gfra1P97785 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Gfra1P97785 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Gfra1P97785 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Gfra1P97785 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.96□□□□□ -0.17
Gfra1P97785 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.96□□□□□ -0.17
Gfra1P97785 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.96□□□□□ -0.17
Gfra1P97785 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.96□□□□□ -0.17
Gfra1P97785 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gfra1P97785 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Gfra1P97785 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Gfra1P97785 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms